STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4640PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: gbm:Gbem_0291 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (330 aa)    
Predicted Functional Partners:
Kfla_4638
Hypothetical protein.
       0.598
Kfla_4639
KEGG: ank:AnaeK_4153 MaoC domain protein dehydratase.
       0.598
Kfla_1919
KEGG: azo:azo1832 hypothetical protein.
  
     0.552
Kfla_4704
PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: noc:Noc_0471 pyruvate decarboxylase; Belongs to the TPP enzyme family.
  
     0.502
Kfla_1927
TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: pzu:PHZ_c1822 hypothetical protein.
 
    0.492
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.