STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4672PFAM: Carbohydrate binding family 6; KEGG: ara:Arad_7994 outer membrane pathogenesis protein. (959 aa)    
Predicted Functional Partners:
Kfla_4271
PFAM: coagulation factor 5/8 type domain protein; KEGG: azc:AZC_0891 glycosyl hydrolase family 2 protein.
  
     0.766
Kfla_4675
PFAM: extracellular solute-binding protein family 1; KEGG: mlo:mlr2244 sugar binding protein of sugar ABC transporter.
 
     0.761
Kfla_3492
PFAM: coagulation factor 5/8 type domain protein; KEGG: hypothetical protein.
 
     0.760
Kfla_4673
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smt:Smal_2681 monosaccharide-transporting ATPase.
 
     0.748
Kfla_4281
KEGG: hypothetical protein.
  
     0.735
Kfla_4674
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mca:MCA1942 sugar ABC transporter, permease protein.
 
     0.731
Kfla_3655
PFAM: coagulation factor 5/8 type domain protein; KEGG: bgl:bglu_1g14790 secreted protein.
 
     0.692
Kfla_4676
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: avn:Avin_51470 alpha-glucosidase.
       0.665
Kfla_4677
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: pen:PSEEN1955 ribose operon repressor RbsR.
 
     0.564
Kfla_2464
PFAM: coagulation factor 5/8 type domain protein; KEGG: saz:Sama_3637 hypothetical protein.
  
     0.547
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.