STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4730TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bmj:BMULJ_00524 polar amino acid transport system permease protein. (215 aa)    
Predicted Functional Partners:
Kfla_4729
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dvm:DvMF_3152 extracellular solute-binding protein family 3.
 0.999
Kfla_4728
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: azc:AZC_4408 amino acid ABC transporter ATP- binding protein.
 
 0.990
Kfla_4731
TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: dac:Daci_4389 polar amino acid ABC transporter, inner membrane subunit.
 
 
0.982
Kfla_5196
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; ionotropic glutamate receptor; KEGG: lch:Lcho_1148 extracellular solute-binding protein.
 
 0.982
Kfla_5003
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: mes:Meso_3149 extracellular solute-binding protein, family 3.
 
 
 0.940
Kfla_5001
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mes:Meso_3147 ABC transporter related.
 
 
 0.926
Kfla_5144
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: smd:Smed_5881 polar amino acid ABC transporter, inner membrane subunit.
 
 
 0.926
Kfla_5198
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sse:Ssed_3762 ABC transporter-related protein.
 
 
 0.926
Kfla_5973
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: dde:Dde_1429 extracellular solute-binding protein.
 
 0.910
Kfla_5142
PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: atc:AGR_pAT_12 GlnH homolog.
 
 
 0.842
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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