STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_4874PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: smd:Smed_5686 glycosyl transferase group 1. (343 aa)    
Predicted Functional Partners:
Kfla_4875
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: ent:Ent638_2160 xylose isomerase domain- containing protein.
 
     0.934
Kfla_4876
KEGG: rle:pRL120266 hypothetical protein.
 
  
 0.833
Kfla_4872
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ecc:c1783 ABC transporter permease.
 
     0.817
Kfla_4873
PFAM: extracellular solute-binding protein family 1; KEGG: ecr:ECIAI1_1335 putative sugar transporter subunit: periplasmic-binding component of ABC superfamily transporter.
 
     0.795
Kfla_4871
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mes:Meso_4515 binding-protein-dependent transport systems inner membrane component.
 
     0.595
Kfla_1230
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bmj:BMULJ_01740 alcohol dehydrogenase.
 
 
 0.554
Kfla_2454
TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: oca:OCAR_6856 alcohol dehydrogenase class 3.
  
  
 0.553
Kfla_0667
PFAM: beta-lactamase domain protein; KEGG: bid:Bind_0430 hydroxyacylglutathione hydrolase.
  
   0.492
Kfla_1951
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: mrd:Mrad2831_6246 alcohol dehydrogenase.
  
     0.429
Kfla_5021
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: aav:Aave_4017 alcohol dehydrogenase.
  
     0.412
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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