STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5086KEGG: rsq:Rsph17025_3768 PhnA protein-like protein. (222 aa)    
Predicted Functional Partners:
Kfla_5087
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: oan:Oant_2127 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
       0.538
Kfla_5085
KEGG: sgl:SG0638 hypothetical protein.
      
0.533
Kfla_5082
TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: pfs:PFLU0604 putative cobalamin biosynthesis protein.
       0.427
Kfla_5083
PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: bcs:BCAN_A1310 precorrin-8X methylmutase.
       0.427
Kfla_5084
TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mno:Mnod_2153 precorrin-3B C17- methyltransferase; Belongs to the precorrin methyltransferase family.
       0.427
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.