STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5345PFAM: IucA/IucC family protein; KEGG: eta:ETA_30300 probable alcaligin biosynthesis protein. (585 aa)    
Predicted Functional Partners:
Kfla_5344
IucA/IucC; KEGG: csa:Csal_1053 IucA/IucC.
  
 0.995
Kfla_3184
L-lysine 6-monooxygenase (NADPH); PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: csa:Csal_1054 L-lysine 6-monooxygenase (NADPH).
  
 0.906
Kfla_2932
L-lysine 6-monooxygenase (NADPH); PFAM: FAD dependent oxidoreductase; KEGG: avi:Avi_5731 L-ornithine N5-oxygenase.
  
 0.898
Kfla_3181
PFAM: Pyridoxal-dependent decarboxylase; KEGG: csa:Csal_1055 pyridoxal-dependent decarboxylase.
 
  
 0.808
Kfla_3183
PFAM: GCN5-related N-acetyltransferase; KEGG: reh:H16_B1681 siderophore biosynthesis related protein/acetyltransferase or N-acetylase of ribosomal proteins (CO.
 
  
 0.792
Kfla_0769
PFAM: peptidase S45 penicillin amidase; KEGG: vei:Veis_1397 penicillin amidase.
 
     0.738
Kfla_4019
PFAM: Pyridoxal-dependent decarboxylase; KEGG: glutamate decarboxylase and related PLP- dependent proteins.
 
  
 0.692
Kfla_3182
PFAM: IucA/IucC family protein; KEGG: sme:SMa2404 RhbC rhizobactin biosynthesis protein.
    
0.593
Kfla_5346
PFAM: protein of unknown function DUF820; KEGG: noc:Noc_2546 hypothetical protein.
       0.578
Kfla_5343
KEGG: ilo:IL1495 hypothetical protein.
       0.511
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.