STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5346PFAM: protein of unknown function DUF820; KEGG: noc:Noc_2546 hypothetical protein. (172 aa)    
Predicted Functional Partners:
Kfla_5344
IucA/IucC; KEGG: csa:Csal_1053 IucA/IucC.
       0.578
Kfla_5345
PFAM: IucA/IucC family protein; KEGG: eta:ETA_30300 probable alcaligin biosynthesis protein.
       0.578
Kfla_5347
PFAM: protein of unknown function DUF820; KEGG: gur:Gura_3383 hypothetical protein.
 
    
0.561
Kfla_5915
Hypothetical protein.
  
     0.472
Kfla_0498
KEGG: xau:Xaut_2562 PilT domain-containing protein.
  
     0.403
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.