STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5354PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: hch:HCH_02851 molybdopterin/thiamine biosynthesis family protein. (396 aa)    
Predicted Functional Partners:
Kfla_5313
PFAM: molybdopterin biosynthesis MoaE protein; KEGG: xom:XOO_0963 molybdopterin-converting factor chain 2.
 0.995
Kfla_1226
PFAM: thiamineS protein; KEGG: scl:sce5755 hypothetical protein.
 
 0.994
Kfla_1840
PFAM: thiamineS protein; KEGG: scl:sce5755 hypothetical protein.
 
 0.994
Kfla_4891
PFAM: thiamineS protein; KEGG: scl:sce5755 hypothetical protein.
 
 0.994
Kfla_0974
PFAM: thiamineS protein; KEGG: afw:Anae109_1160 molybdopterin converting factor, subunit 1.
  
 0.992
Kfla_2779
PFAM: aminotransferase class V; KEGG: gur:Gura_1493 aminotransferase, class V.
   
 0.983
Kfla_4909
PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sat:SYN_01251 cysteine desulfurase / selenocysteine lyase.
   
 0.983
Kfla_2848
TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: mms:mma_0316 thiamine biosynthesis protein ThiS.
  
 
 0.980
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 0.967
thiC
Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
 
  
 0.942
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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