STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5361KEGG: psa:PST_0204 hypothetical protein. (90 aa)    
Predicted Functional Partners:
egtD
Methyltransferase; Catalyzes the SAM-dependent triple methylation of the alpha- amino group of histidine to form hercynine, a step in the biosynthesis pathway of ergothioneine; Belongs to the methyltransferase superfamily. EgtD family.
   
    0.528
Kfla_0634
PFAM: protein of unknown function DUF1508; KEGG: ret:RHE_CH03509 hypothetical protein.
  
  
 0.513
Kfla_5360
Hypothetical protein.
       0.500
Kfla_4457
Multi-sensor signal transduction histidine kinase; KEGG: scl:sce0206 two-component system sensor histidine kinase/response regulator, hybrid ('one- component system'); TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; response regulator receiver; PAS fold domain protein; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; PAS domain containing protein; ATP-binding region A [...]
  
  
 0.474
Kfla_5393
KEGG: sme:SM_b20087 hypothetical protein.
 
    0.469
Kfla_0904
PFAM: CsbD family protein; KEGG: pfo:Pfl01_4351 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
  
 0.450
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.