STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5545PFAM: SNARE associated Golgi protein; KEGG: bgl:bglu_1g06460 putative DedA family transmembrane protein. (212 aa)    
Predicted Functional Partners:
Kfla_5248
PFAM: SNARE associated Golgi protein; KEGG: par:Psyc_0191 alkaline phosphatase.
  
     0.764
Kfla_5546
PFAM: cytochrome P450; KEGG: pau:PA14_20970 cytochrome P450.
       0.565
Kfla_5544
PFAM: polysaccharide deacetylase; KEGG: scl:sce7515 hypothetical protein.
       0.501
Kfla_5547
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pla:Plav_1071 regulatory protein ArsR.
       0.419
Kfla_5548
PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bpt:Bpet2983 hypothetical protein.
       0.419
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.