STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5637PFAM: Hemerythrin HHE cation binding domain protein. (143 aa)    
Predicted Functional Partners:
Kfla_5638
Hypothetical protein.
       0.625
Kfla_1397
KEGG: hypothetical protein.
  
     0.581
Kfla_1149
KEGG: vha:VIBHAR_02853 hypothetical protein.
  
     0.579
Kfla_5639
Hypothetical protein.
       0.576
Kfla_5635
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: atc:AGR_C_1531 hypothetical protein.
       0.570
Kfla_5636
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: spe:Spro_2480 EmrB/QacA family drug resistance transporter.
       0.570
Kfla_7055
KEGG: hypothetical protein LOC100168392.
  
     0.506
Kfla_5353
Hypothetical protein.
  
     0.501
Kfla_5285
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ade:Adeh_1270 DNA internalization-related competence protein ComEC/Rec2.
  
    0.451
Kfla_5943
Hypothetical protein.
  
     0.434
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.