STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5791KEGG: mca:MCA2786 SecC motif-containing protein; Belongs to the UPF0225 family. (139 aa)    
Predicted Functional Partners:
Kfla_5792
KEGG: scl:sce7902 hypothetical protein.
       0.645
Kfla_5790
PFAM: YCII-related; KEGG: mlo:mlr4612 hypothetical protein.
       0.548
Kfla_5793
PFAM: transcriptional regulator PadR family protein; KEGG: azc:AZC_4002 transcriptional regulator.
       0.441
Kfla_5794
PFAM: protein of unknown function DUF1707.
       0.441
Kfla_0904
PFAM: CsbD family protein; KEGG: pfo:Pfl01_4351 CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
     0.408
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.