STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_5866KEGG: cps:CPS_3455 hypothetical protein. (67 aa)    
Predicted Functional Partners:
Kfla_5867
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sml:Smlt1263 putative transmembrane protein.
 
  
 0.990
Kfla_5865
Hypothetical protein.
       0.829
Kfla_0428
PFAM: band 7 protein; KEGG: mpo:Mpop_4450 band 7 protein.
  
  
 0.543
Kfla_3035
PFAM: band 7 protein; SMART: band 7 protein; KEGG: mxa:MXAN_0423 SPFH domain-containing protein/band 7 family protein.
  
  
 0.543
Kfla_3700
PFAM: band 7 protein; SMART: band 7 protein; KEGG: sfu:Sfum_2310 band 7 protein.
  
  
 0.543
Kfla_5863
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dvl:Dvul_0849 ABC transporter related.
       0.529
Kfla_5885
PFAM: band 7 protein.
  
  
 0.516
Kfla_5862
Hypothetical protein.
       0.509
Kfla_5864
Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: vpa:VPA0034 GntR family transcriptional regulator.
       0.509
Kfla_5868
PFAM: aminotransferase class IV; KEGG: met:M446_0051 aminotransferase class IV.
       0.501
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.