STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6020PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: scl:sce0787 hypothetical protein. (570 aa)    
Predicted Functional Partners:
Kfla_3907
PFAM: GMC oxidoreductase; glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; KEGG: mxa:MXAN_3822 hypothetical protein.
  
  
 
0.926
Kfla_6484
KEGG: prw:PsycPRwf_0069 cholesterol oxidase; Belongs to the GMC oxidoreductase family.
  
  
 
0.911
Kfla_2788
PFAM: cytochrome c class I; KEGG: pnu:Pnuc_0456 cytochrome c oxidase, cbb3- type, subunit III.
  
 
 0.814
Kfla_6021
PFAM: Aldehyde Dehydrogenase; KEGG: scl:sce4495 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.751
Kfla_6335
TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Beta- ketoacyl synthase; Acyl transferase; Luciferase-like monooxygenase; phosphopantetheine-binding; condensation domain protein; KEGG: rso:RS05860 peptide synthetase protein.
 
   
 0.507
Kfla_6022
PFAM: Tetratricopeptide TPR_4; KEGG: ade:Adeh_3797 hypothetical protein.
       0.469
Kfla_0353
SMART: Ankyrin; KEGG: sml:Smlt2895 putative ankyrin repeat- containing exported protein.
    
 0.440
Kfla_0411
PFAM: Ankyrin; SMART: Ankyrin; KEGG: hypothetical protein.
    
 0.440
Kfla_2966
Hypothetical protein.
    
 0.440
Kfla_4867
KEGG: scl:sce7040 hypothetical protein.
    
 0.440
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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