STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6175PFAM: Hemerythrin HHE cation binding domain protein; KEGG: HHE domain protein. (192 aa)    
Predicted Functional Partners:
Kfla_6174
KEGG: rlt:Rleg2_4180 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase.
       0.542
trpB-2
Pyridoxal-phosphate dependent TrpB-like enzyme; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.518
Kfla_6173
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: shn:Shewana3_1740 peptidase S8 and S53, subtilisin, kexin, sedolisin; Belongs to the peptidase S8 family.
       0.429
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.