STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6332PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; KEGG: shn:Shewana3_1740 peptidase S8 and S53, subtilisin, kexin, sedolisin. (1238 aa)    
Predicted Functional Partners:
Kfla_1559
Hypothetical protein.
  
     0.737
Kfla_5233
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: mxa:MXAN_3285 S8A family peptidase; Belongs to the peptidase S8 family.
  
     0.577
Kfla_0067
PFAM: transcriptional regulator TrmB; regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: afw:Anae109_0915 two component LuxR family transcriptional regulator.
 
     0.557
Kfla_5405
PFAM: transcriptional regulator TrmB; SMART: regulatory protein LuxR; KEGG: hypothetical protein.
  
     0.454
Kfla_6333
PFAM: Luciferase-like monooxygenase; KEGG: bcj:BCAS0054 putative luciferase-like monooxygenase.
       0.444
Kfla_6061
PFAM: protein of unknown function DUF407; KEGG: mxa:MXAN_3625 hypothetical protein.
  
     0.435
Kfla_1509
Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: tgr:Tgr7_1961 transcriptional regulator, ArsR family.
  
     0.429
Kfla_0840
PFAM: aminoglycoside phosphotransferase; KEGG: Os09g0498500; hypothetical protein; K00301 sarcosine oxidase.
  
     0.424
Kfla_4187
PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: sfu:Sfum_2919 peptidase S8 and S53, subtilisin, kexin, sedolisin.
  
     0.424
Kfla_2298
TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: dal:Dalk_1487 YD repeat protein.
 
    0.405
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.