STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6362PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1221 probable sugar transport inner membrane protein. (276 aa)    
Predicted Functional Partners:
Kfla_6361
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: atc:AGR_L_1220 probable uspA protein.
 
 0.964
Kfla_6360
PFAM: extracellular solute-binding protein family 1; KEGG: atc:AGR_L_1217 hypothetical protein.
 
   0.956
Kfla_6354
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: smd:Smed_3327 binding-protein-dependent transport systems inner membrane component.
  
  
 
0.911
Kfla_6359
PFAM: FAD dependent oxidoreductase; KEGG: atc:AGR_L_1216 hypothetical protein.
 
     0.902
Kfla_6358
Transcriptional regulator, LacI family; PFAM: regulatory protein LacI; SMART: regulatory protein LacI; KEGG: atc:AGR_L_1215 hypothetical protein.
 
     0.900
Kfla_4167
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
 
 0.821
Kfla_1466
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120664 putative permease component of ABC transporter.
   0.816
Kfla_0366
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: scl:sce3058 sugar ABC transporter, permease protein.
   0.808
Kfla_4510
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SM_b20232 putative suagr ABC transporter permease protein.
   0.807
Kfla_1510
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lch:Lcho_3242 binding-protein-dependent transport systems inner membrane component.
   0.806
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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