STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6370PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: lpp:lpp1608 hypothetical protein. (410 aa)    
Predicted Functional Partners:
Kfla_1231
PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce4550 major facilitator superfamily permease.
 
     0.769
Kfla_3329
PFAM: major facilitator superfamily MFS_1; KEGG: mxa:MXAN_5267 major facilitator transporter.
  
     0.766
Kfla_2128
PFAM: major facilitator superfamily MFS_1; KEGG: scl:sce4550 major facilitator superfamily permease.
  
     0.765
Kfla_5901
PFAM: major facilitator superfamily MFS_1; KEGG: rlt:Rleg2_2357 major facilitator superfamily MFS_1.
  
     0.624
Kfla_6369
PFAM: protein of unknown function DUF1486; KEGG: hypothetical protein; K01876 aspartyl-tRNA synthetase.
       0.594
Kfla_3829
PFAM: major facilitator superfamily MFS_1; KEGG: avi:Avi_7122 MFS permease.
  
     0.446
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.