STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6402Hypothetical protein; KEGG: mxa:MXAN_5009 type I phosphodiesterase/nucleotide pyrophosphatase family protein. (342 aa)    
Predicted Functional Partners:
Kfla_6403
PFAM: ABC-2 type transporter; KEGG: aha:AHA_0486 ABC-type multidrug transport system, permease component.
       0.510
Kfla_6404
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bbt:BBta_7849 ABC transporter permease ATP- binding protein.
       0.510
Kfla_5285
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: ade:Adeh_1270 DNA internalization-related competence protein ComEC/Rec2.
  
     0.474
Kfla_6401
PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase.
       0.459
Kfla_5875
Hypothetical protein.
  
     0.456
Kfla_3106
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Tetratricopeptide TPR_4; TPR repeat-containing protein; NB- ARC domain protein; transcriptional regulator domain protein; SMART: Tetratricopeptide domain protein; KEGG: scl:sce5225 protein kinase.
  
     0.440
Kfla_6405
PFAM: regulatory protein TetR; KEGG: mlo:mlr3851 TetR family transcriptional regulator.
       0.421
Kfla_6406
PFAM: Xylose isomerase domain protein TIM barrel; KEGG: geo:Geob_1671 xylose isomerase domain protein TIM barrel.
       0.421
Kfla_1652
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: hypothetical protein.
  
     0.415
Kfla_5533
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; NB-ARC domain protein; Tetratricopeptide TPR_4; TPR repeat- containing protein; SMART: helix-turn-helix domain protein; Tetratricopeptide domain protein; KEGG: scl:sce8759 hypothetical protein.
  
     0.402
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.