STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6476PFAM: Endonuclease/exonuclease/phosphatase; KEGG: gbm:Gbem_2727 endonuclease/exonuclease/phosphatase. (272 aa)    
Predicted Functional Partners:
Kfla_1953
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: scl:sce4785 hypothetical protein.
  
     0.650
Kfla_6395
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: hypothetical protein.
 
     0.595
Kfla_6477
Putative protein related to photosystem II stability/assembly factor; KEGG: spl:Spea_3920 BNR repeat-containing glycosyl hydrolase.
       0.581
Kfla_6078
PFAM: beta-lactamase; KEGG: beta-lactamase.
     0.454
Kfla_2822
PFAM: Endonuclease/exonuclease/phosphatase; KEGG: met:M446_0900 endonuclease/exonuclease/phosphatase.
  
     0.443
Kfla_6478
PFAM: Bile acid:sodium symporter; KEGG: mxa:MXAN_3829 sodium/bile acid symporter family protein.
       0.422
Kfla_6475
PFAM: NLP/P60 protein; KEGG: gsu:GSU2277 NLP/P60 family lipoprotein.
       0.418
Kfla_6768
KEGG: xcb:XC_1200 hypothetical protein.
  
     0.406
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.