STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6488PFAM: protein of unknown function DUF214; KEGG: hha:Hhal_1416 hypothetical protein. (634 aa)    
Predicted Functional Partners:
Kfla_3204
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gsu:GSU1162 ABC transporter, ATP-binding protein.
 
 
 0.643
Kfla_5714
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: gbm:Gbem_3264 ABC transporter related protein.
 
 
 0.640
Kfla_6609
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eba:ebA4061 putative ABC transporter protein,ATPase component.
 
 
 0.608
Kfla_0208
PFAM: protein of unknown function DUF214; KEGG: afw:Anae109_1773 hypothetical protein.
  
     0.602
Kfla_5245
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_1100 ABC transporter related.
 
 
 0.580
Kfla_5468
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_1100 ABC transporter related.
 
 
 0.574
Kfla_3230
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pla:Plav_1100 ABC transporter related.
 
 
 0.569
Kfla_6489
PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_1768 TetR family transcriptional regulator.
       0.559
Kfla_3130
Hypothetical protein; KEGG: sse:Ssed_2634 ribonuclease.
   
 
 0.557
Kfla_3456
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: saz:Sama_1468 putative macrolide efflux ABC transporter, ATP-binding protein.
 
 
 0.541
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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