STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6491PFAM: metallophosphoesterase; KEGG: afw:Anae109_2854 metallophosphoesterase. (1094 aa)    
Predicted Functional Partners:
Kfla_4042
TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: dal:Dalk_1487 YD repeat protein.
 
     0.580
Kfla_3074
PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: acp:A2cp1_0869 glutamate synthase (ferredoxin).
  
    0.563
Kfla_5244
PFAM: aminoglycoside phosphotransferase; KEGG: scl:sce5395 aminoglycoside phosphotransferase.
  
     0.541
Kfla_2298
TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; KEGG: dal:Dalk_1487 YD repeat protein.
 
     0.532
Kfla_3468
Conserved hypothetical protein; KEGG: dal:Dalk_1996 transcriptional regulator, ArsR family.
  
    0.530
Kfla_4388
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: dps:DP1655 hypothetical protein.
 
     0.520
Kfla_4030
PFAM: regulatory protein TetR; KEGG: pfo:Pfl01_2955 TetR family transcriptional regulator.
  
     0.518
Kfla_3566
KEGG: pla:Plav_2389 hypothetical protein.
  
    0.485
Kfla_4041
PFAM: Ricin B lectin; FG-GAP repeat protein; SMART: Ricin B lectin; KEGG: acp:A2cp1_3748 hypothetical protein.
  
     0.484
Kfla_5584
PFAM: aminoglycoside phosphotransferase; KEGG: tmz:Tmz1t_1431 fructosamine kinase.
  
     0.468
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.