STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6554PFAM: proline racemase; KEGG: mlo:mll3979 proline racemase; Belongs to the proline racemase family. (333 aa)    
Predicted Functional Partners:
Kfla_6556
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; HI0933 family protein; KEGG: vei:Veis_0721 FAD dependent oxidoreductase.
 
     0.958
Kfla_6557
PFAM: FAD dependent oxidoreductase; KEGG: dat:HRM2_29060 SoxB2.
 
   
 0.956
Kfla_6555
PFAM: dihydrodipicolinate synthetase; KEGG: swd:Swoo_2822 dihydrodipicolinate synthetase; Belongs to the DapA family.
 
  
 0.950
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
    
 0.922
Kfla_0106
PFAM: Proline dehydrogenase; KEGG: bte:BTH_I1366 proline dehydrogenase superfamily protein.
    
 0.908
Kfla_2239
D-aspartate oxidase; PFAM: FAD dependent oxidoreductase; KEGG: DDO; D-aspartate oxidase; K00272 D-aspartate oxidase.
    
 0.908
Kfla_5015
D-aspartate oxidase; PFAM: FAD dependent oxidoreductase; KEGG: predicted protein.
    
 0.908
Kfla_6401
PFAM: Proline dehydrogenase; KEGG: mxa:MXAN_7405 proline dehydrogenase.
    
 0.908
Kfla_0400
PFAM: alpha/beta hydrolase fold; KEGG: rpb:RPB_1894 proline iminopeptidase.
     
  0.900
Kfla_6961
KEGG: bja:bll4403 proline iminopeptidase; TIGRFAM: proline iminopeptidase; PFAM: alpha/beta hydrolase fold; Belongs to the peptidase S33 family.
     
  0.900
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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