STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6558Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein; KEGG: spe:Spro_2487 XRE family transcriptional regulator. (200 aa)    
Predicted Functional Partners:
Kfla_6559
PFAM: NAD-dependent epimerase/dehydratase; KEGG: spe:Spro_3058 NAD-dependent epimerase/dehydratase.
       0.754
Kfla_6554
PFAM: proline racemase; KEGG: mlo:mll3979 proline racemase; Belongs to the proline racemase family.
       0.662
Kfla_6556
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; HI0933 family protein; KEGG: vei:Veis_0721 FAD dependent oxidoreductase.
  
  
 0.648
Kfla_6557
PFAM: FAD dependent oxidoreductase; KEGG: dat:HRM2_29060 SoxB2.
  
    0.645
Kfla_6555
PFAM: dihydrodipicolinate synthetase; KEGG: swd:Swoo_2822 dihydrodipicolinate synthetase; Belongs to the DapA family.
   
   0.591
Kfla_6560
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: azc:AZC_3031 transcriptional regulator.
  
  
 0.577
Kfla_1553
PFAM: branched-chain amino acid transport; KEGG: mxa:MXAN_5157 hypothetical protein.
 
   
 0.472
Kfla_4786
Transcriptional regulator, XRE family; PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bph:Bphy_4506 XRE family transcriptional regulator.
 
 
0.400
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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