STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6633PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: scl:sce8243 fumarylacetoacetase family protein. (308 aa)    
Predicted Functional Partners:
Kfla_0892
PFAM: Aldehyde Dehydrogenase; KEGG: gur:Gura_3314 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.907
Kfla_6632
PFAM: Aldehyde Dehydrogenase; KEGG: ccs:CCNA_02881 oxoglutarate semialdehyde dehydrogenase.
 
  
 0.903
Kfla_6631
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: hypothetical protein LOC100209598; Belongs to the IlvD/Edd family.
 
   
 0.901
Kfla_6629
KEGG: cbd:CBUD_1719 hypothetical peptidase.
 
     0.866
Kfla_6630
KEGG: dat:HRM2_20330 hypothetical protein.
 
     0.827
Kfla_6634
PFAM: D-galactarate dehydratase/Altronate hydrolase domain protein; KEGG: hypothetical protein.
 
   
 0.822
Kfla_6628
PFAM: FAD linked oxidase domain protein; KEGG: scl:sce0752 putative glycolate oxidase.
       0.777
Kfla_6635
Transcriptional regulator, GntR family; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mes:Meso_4461 transcriptional regulator, GntR family.
     
 0.521
Kfla_4530
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: aav:Aave_3759 dihydroxyacid dehydratase; Belongs to the IlvD/Edd family.
 
   
 0.480
Kfla_3120
KEGG: reu:Reut_A1475 hypothetical protein.
  
     0.443
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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