STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6682KEGG: ade:Adeh_2880 TetR family transcriptional regulator. (199 aa)    
Predicted Functional Partners:
purC-2
KEGG: sfu:Sfum_1263 phosphoribosylaminoimidazole- succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase.
       0.561
Kfla_6681
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mxa:MXAN_3398 FAD-dependent oxidoreductase.
       0.561
kduI
4-deoxy-L-threo-5-hexosulose-uronateketol- isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
   
    0.478
Kfla_4182
4-deoxy-L-threo-5-hexosulose-uronateketol- isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
   
    0.478
Kfla_2001
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein ArsR; KEGG: scl:sce6114 hypothetical protein.
  
    0.472
Kfla_1932
KEGG: scl:sce6114 hypothetical protein.
  
    0.453
Kfla_3353
KEGG: acp:A2cp1_0408 hypothetical protein.
  
    0.424
Kfla_1026
KEGG: ret:RHE_CH00885 hypothetical protein.
   
    0.416
Kfla_1030
KEGG: sun:SUN_1004 hypothetical protein.
   
    0.416
Kfla_3385
KEGG: ara:Arad_1152 hypothetical protein.
   
    0.416
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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