STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6806Putative phytochrome sensor protein; PFAM: GAF domain protein; transcriptional regulator domain protein; KEGG: reu:Reut_C6170 helix-turn-helix, fis-type. (485 aa)    
Predicted Functional Partners:
Kfla_6808
PFAM: protein of unknown function DUF779; KEGG: mxa:MXAN_5039 hypothetical protein.
 
     0.856
Kfla_6807
PFAM: Aldehyde Dehydrogenase; KEGG: mxa:MXAN_5040 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.816
Kfla_6662
Dihydroxyacetone kinase, DhaK subunit; KEGG: scl:sce2491 Glycerone kinase DAK1 domain- containing protein; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase.
   
 
 0.797
Kfla_6663
TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: dvm:DvMF_2583 dihydroxyacetone kinase, L subunit.
   
 
 0.797
Kfla_6664
TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; dihydroxyacetone kinase, phosphotransfer subunit; phosphocarrier, HPr family; PFAM: PEP-utilizing protein; PTS system fructose subfamily IIA component; PEP-utilising protein domain protein; PEP-utilising protein mobile region; phosphoryl transfer system HPr; KEGG: dde:Dde_1180 phosphoenolpyruvate--protein phosphotransferase; Belongs to the PEP-utilizing enzyme family.
     
 0.516
Kfla_0894
PFAM: Transketolase central region; Transketolase domain protein; dehydrogenase E1 component; KEGG: smt:Smal_2640 transketolase domain protein.
     
 0.468
Kfla_5190
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpb:RPB_3414 FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
   
 0.427
Kfla_1570
PFAM: 3-dehydroquinate synthase; iron-containing alcohol dehydrogenase; KEGG: sse:Ssed_0112 glycerol dehydrogenase-like protein.
  
  
 0.400
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.