STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6844Hypothetical protein. (50 aa)    
Predicted Functional Partners:
Kfla_6843
PFAM: extracellular solute-binding protein family 1; KEGG: dde:Dde_3657 sugar ABC transporter, substrate- binding protein.
       0.773
Kfla_6845
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ank:AnaeK_3354 alcohol dehydrogenase zinc- binding domain protein.
       0.636
Kfla_6846
PFAM: flavin reductase domain protein FMN-binding; KEGG: rlt:Rleg2_4430 flavin reductase domain protein FMN-binding.
       0.600
Kfla_6847
PFAM: beta-lactamase; KEGG: msl:Msil_0126 beta-lactamase.
       0.600
Kfla_6848
TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: Aldehyde Dehydrogenase; KEGG: reu:Reut_B3740 phenylacetic acid degradation protein paaN2.
       0.600
Kfla_6841
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcj:BCAL3039 ABC transporter, membrane permease.
       0.594
Kfla_6842
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bch:Bcen2424_6304 binding-protein-dependent transport systems inner membrane component.
       0.594
Kfla_6849
TIGRFAM: phenylacetic acid degradation protein PaaD; PFAM: thioesterase superfamily protein; KEGG: bja:blr2896 phenylacetic acid degradation protein.
       0.433
Kfla_6850
KEGG: mes:Meso_2825 beta-ketoadipyl CoA thiolase; TIGRFAM: beta-ketoadipyl CoA thiolase; acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.433
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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