STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kfla_6859PFAM: regulatory protein TetR; KEGG: bvi:Bcep1808_4096 TetR family transcriptional regulator. (208 aa)    
Predicted Functional Partners:
Kfla_6412
TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; KEGG: maq:Maqu_0168 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
  
     0.586
Kfla_6860
PFAM: ABC-2 type transporter; KEGG: aeh:Mlg_2716 ABC-2 type transporter.
       0.505
Kfla_6861
KEGG: aeh:Mlg_2715 daunorubicin resistance ABC transporter ATPase subunit; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase.
       0.505
Kfla_1663
PFAM: lipase class 2; KEGG: hypothetical protein.
  
     0.481
Kfla_1764
KEGG: reh:H16_A3740 cyclohexanone monooxygenase.
  
     0.481
Kfla_1769
Transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: abo:ABO_2697 hypothetical protein.
  
     0.480
Kfla_5673
KEGG: rme:Rmet_3598 flavin-containing monooxygenase FMO.
  
     0.468
Kfla_4557
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: pap:PSPA7_5729 putative acyl-CoA dehydrogenase.
  
     0.458
Kfla_3419
PFAM: alpha/beta hydrolase fold; KEGG: cti:RALTA_A1767 putative oxidoreductase; alpha/beta hydrolase fold.
  
     0.447
Kfla_4558
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: abo:ABO_1701 acyl-CoA dehydrogenase domain- containing protein.
  
     0.431
Your Current Organism:
Kribbella flavida
NCBI taxonomy Id: 479435
Other names: K. flavida DSM 17836, Kribbella flavida DSM 17836, Kribbella flavida str. DSM 17836, Kribbella flavida strain DSM 17836
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.