STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0183PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: ank:AnaeK_3618 fumarate reductase/succinate dehydrogenase flavoprotein domain protein. (592 aa)    
Predicted Functional Partners:
Elen_1143
KEGG: dde:Dde_3639 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region.
  
 
 0.758
Elen_1144
PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: dvm:DvMF_2462 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit.
  
 
 0.758
Elen_0253
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: hsm:HSM_0781 succinate dehydrogenase and fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 0.696
Elen_2926
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aeh:Mlg_0217 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
 
 0.656
Elen_0175
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
 
 0.617
Elen_2541
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
   
 
 0.617
Elen_1468
Transcriptional regulator, XRE family; PFAM: aminotransferase class I and II; SMART: helix-turn-helix domain protein; KEGG: pap:PSPA7_2327 aminotransferase AlaT.
  
 
 0.614
Elen_0186
PFAM: aminotransferase class I and II; KEGG: pca:Pcar_1888 aspartate aminotransferase.
   
 
 0.608
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: bha:BH3186 argininosuccinate lyase.
     
 0.607
Elen_0176
acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
  0.600
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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