STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0228TIGRFAM: phosphonate C-P lyase system protein PhnG; KEGG: smd:Smed_4235 phosphonate metabolism PhnG. (147 aa)    
Predicted Functional Partners:
Elen_0229
TIGRFAM: phosphonate C-P lyase system protein PhnH; KEGG: met:M446_2913 phosphonate C-P lyase system protein PhnH.
 
 0.999
Elen_0230
PFAM: phosphonate metabolism; KEGG: xau:Xaut_1314 phosphonate metabolism.
 
 0.999
Elen_0234
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_2294 phosphonate C-P lyase system protein PhnL.
 
 0.998
Elen_0231
PFAM: phosphonate metabolism PhnJ; KEGG: rpa:RPA0692 phosphonate metabolism PhnJ.
 
 
 0.997
Elen_0232
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_2293 ABC transporter related.
 
 
 0.997
Elen_0233
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cti:RALTA_B1185 C-P (carbon-phosphorous) lyase component; membrane associated; metallo-dependent hydrolase domain.
 
 
 0.995
Elen_0224
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: bha:BH0468 phosphonates transport system (phosphate-binding protein).
 
  
 0.950
phnC
Phosphonate ABC transporter, ATPase subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.
 
  
 0.948
Elen_0227
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcb:BCB4264_A3792 phosphonate ABC transporter, permease protein.
 
  
 0.879
Elen_0226
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: maq:Maqu_3259 phosphonate ABC transporter, inner membrane subunit.
 
  
 0.876
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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