STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0234PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_2294 phosphonate C-P lyase system protein PhnL. (232 aa)    
Predicted Functional Partners:
Elen_0228
TIGRFAM: phosphonate C-P lyase system protein PhnG; KEGG: smd:Smed_4235 phosphonate metabolism PhnG.
 
 0.998
Elen_0229
TIGRFAM: phosphonate C-P lyase system protein PhnH; KEGG: met:M446_2913 phosphonate C-P lyase system protein PhnH.
 
 0.998
Elen_0230
PFAM: phosphonate metabolism; KEGG: xau:Xaut_1314 phosphonate metabolism.
 
 0.998
Elen_0233
PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cti:RALTA_B1185 C-P (carbon-phosphorous) lyase component; membrane associated; metallo-dependent hydrolase domain.
 
 
 0.998
Elen_0231
PFAM: phosphonate metabolism PhnJ; KEGG: rpa:RPA0692 phosphonate metabolism PhnJ.
 
 
 0.987
Elen_0232
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_2293 ABC transporter related.
 
 
0.972
Elen_0224
TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: bha:BH0468 phosphonates transport system (phosphate-binding protein).
 
  
 0.927
Elen_1221
KEGG: dde:Dde_1182 oligopeptide/dipeptide ABC transporter, ATP-binding protein-like; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
     
0.899
Elen_2149
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hsm:HSM_0785 ABC transporter related.
 
     
0.884
Elen_2200
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_1326 ATPase.
 
     
0.835
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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