STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0282Hypothetical protein. (138 aa)    
Predicted Functional Partners:
Elen_0284
Hypothetical protein.
 
     0.852
Elen_0283
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: pmy:Pmen_2629 MarR family transcriptional regulator.
       0.762
Elen_0285
PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein; KEGG: hypothetical protein; K03686 molecular chaperone DnaJ.
       0.722
Elen_2177
PFAM: protein of unknown function DUF214; KEGG: hha:Hhal_1917 protein of unknown function DUF214.
  
     0.648
Elen_1560
PFAM: protein of unknown function DUF1113; KEGG: glo:Glov_2883 metal dependent phosphohydrolase.
 
     0.464
Elen_0281
Diguanylate cyclase/phosphodiesterase with GAF sensor; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; KEGG: dds:Ddes_1762 diguanylate cyclase/phosphodiesterase.
       0.433
dnaK
2-alkenal reductase; Acts as a chaperone; Belongs to the heat shock protein 70 family.
       0.411
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.