STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0338PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: pde:Pden_1425 ABC transporter related. (1194 aa)    
Predicted Functional Partners:
Elen_0304
Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: csa:Csal_2914 transcriptional regulator, AraC family.
 
  
 0.546
Elen_0339
TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: bph:Bphy_3357 EmrB/QacA family drug resistance transporter.
     
 0.468
Elen_1269
KEGG: btr:Btr_2267 hypothetical protein.
   
 0.452
Elen_0337
PFAM: regulatory protein TetR; KEGG: scl:sce5956 TetR/AcrR family transcriptional regulator.
       0.443
Elen_2945
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: met:M446_0091 ABC transporter related.
 
 
  
0.425
Elen_2946
PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: mrd:Mrad2831_6118 ABC transporter related.
 
 
  
0.422
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.