STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0546PFAM: protein of unknown function DUF192; KEGG: bpt:Bpet2081 hypothetical protein. (124 aa)    
Predicted Functional Partners:
Elen_0547
Hypothetical protein; KEGG: similar to elastin microfibril interfacer 2.
       0.781
Elen_0548
PFAM: peptidase A24A prepilin type IV; KEGG: bte:BTH_I1134 type IV pilus prepilin peptidase PilD.
       0.779
Elen_0545
Hypothetical protein.
       0.775
Elen_0549
Hypothetical protein.
       0.708
Elen_0550
Hypothetical protein.
       0.624
Elen_0551
PFAM: TadE family protein; KEGG: pca:Pcar_1749 Flp pilus assembly protein TadG.
       0.624
Elen_0552
Hypothetical protein.
       0.624
Elen_0544
Hypothetical protein.
       0.608
Elen_0543
Hypothetical protein; KEGG: ade:Adeh_0129 methyltransferase type 11.
       0.578
Elen_0542
PFAM: TadE family protein; KEGG: bpt:Bpet3381 putative Flp pilus assembly protein.
       0.551
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.