STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0557Hypothetical protein. (184 aa)    
Predicted Functional Partners:
Elen_0558
TIGRFAM: cell wall/surface repeat protein; KEGG: outer membrane adhesin like proteiin.
       0.773
Elen_0555
PFAM: type II secretion system protein; KEGG: bbr:BB2099 hypothetical protein.
       0.668
Elen_0556
PFAM: type II secretion system protein; KEGG: type II secretion system protein.
       0.668
Elen_0553
TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: cak:Caul_4194 Flp pilus assembly protein CpaB.
       0.641
Elen_0554
PFAM: type II secretion system protein E; KEGG: eba:ebA3705 secretion ATPase protein, type II secretion system protein E.
       0.641
Elen_0559
PFAM: YcfA family protein; KEGG: rlt:Rleg2_4059 YcfA family protein.
       0.598
Elen_0550
Hypothetical protein.
       0.535
Elen_0551
PFAM: TadE family protein; KEGG: pca:Pcar_1749 Flp pilus assembly protein TadG.
       0.535
Elen_0552
Hypothetical protein.
       0.535
Elen_0560
PFAM: protein of unknown function UPF0150; KEGG: bph:Bphy_1857 hypothetical protein.
       0.524
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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