STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0797PFAM: peptidase C60 sortase A and B; KEGG: bha:BH3294 hypothetical protein. (230 aa)    
Predicted Functional Partners:
Elen_0796
PFAM: Cna B domain protein; KEGG: bce:BC3526 collagen adhesion protein.
 
 
   0.878
Elen_0723
TIGRFAM: sortase, SrtB family; KEGG: bha:BH3294 hypothetical protein.
  
     0.774
Elen_0908
KEGG: bha:BH3294 hypothetical protein.
  
     0.774
Elen_1677
PFAM: peptidase C60 sortase A and B; KEGG: bce:BC4543 hypothetical protein.
  
     0.770
Elen_1510
PFAM: Cna B domain protein; KEGG: bce:BC3526 collagen adhesion protein.
 
 
   0.751
Elen_0794
Hypothetical protein.
 
     0.636
Elen_0795
Hypothetical protein.
       0.562
Elen_0799
PFAM: helicase domain protein; type III restriction protein res subunit; SMART: DEAD-like helicase; helicase domain protein; KEGG: bbr:BB0908 putative helicase.
       0.499
Elen_0798
Hypothetical protein.
       0.498
Elen_0800
Hypothetical protein; KEGG: sat:SYN_01826 putative cytoplasmic protein.
       0.498
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.