STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0842Hypothetical protein. (76 aa)    
Predicted Functional Partners:
Elen_0843
PFAM: glycosyl transferase family 2; KEGG: pol:Bpro_5439 glycosyl transferase, family 2.
       0.752
Elen_0844
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: sun:SUN_1216 hypothetical protein.
       0.485
Elen_0841
Hypothetical protein.
       0.458
Elen_0845
PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: par:Psyc_0189 hypothetical protein.
       0.415
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.