STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_0939PFAM: integrase family protein; KEGG: hso:HS_0424 phage integrase; Belongs to the 'phage' integrase family. (357 aa)    
Predicted Functional Partners:
Elen_0941
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: hso:HS_0422 transcriptional regulator.
 
     0.888
Elen_1529
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: hso:HS_0422 transcriptional regulator.
 
     0.774
Elen_0938
Hypothetical protein.
       0.773
Elen_0940
Hypothetical protein.
       0.773
Elen_1528
Conserved hypothetical protein; KEGG: hso:HS_0423 phage-related protein.
  
     0.773
Elen_0839
PFAM: Relaxase/mobilization nuclease family protein; KEGG: hsm:HSM_1190 relaxase/mobilization nuclease family protein.
 
     0.514
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
     
 0.469
Elen_0935
PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; KEGG: acp:A2cp1_4509 ParB-like partition protein.
 
    0.449
Elen_0937
PFAM: protein of unknown function UPF0102; KEGG: dal:Dalk_4642 protein of unknown function UPF0102; Belongs to the UPF0102 family.
       0.405
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.