STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1024PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sus:Acid_7937 ABC transporter related. (234 aa)    
Predicted Functional Partners:
Elen_1025
PFAM: protein of unknown function DUF214; KEGG: mxa:MXAN_4201 putative macrolide efflux ABC transporter, permease protein.
 
 0.997
Elen_0742
PFAM: protein of unknown function DUF214; KEGG: dal:Dalk_4858 protein of unknown function DUF214.
 
 0.989
Elen_1023
TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: swi:Swit_2151 RND family efflux transporter MFP subunit.
 
 
 0.975
Elen_2177
PFAM: protein of unknown function DUF214; KEGG: hha:Hhal_1917 protein of unknown function DUF214.
  
 
 0.934
Elen_0232
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: maq:Maqu_2293 ABC transporter related.
     
0.899
Elen_0740
KEGG: aba:Acid345_1830 secretion protein HlyD.
 
 
 0.747
Elen_2148
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: hap:HAPS_1116 ABC-type oligopeptide transport systems, ATP-binding/permease; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; binding-protein- dependent transport systems inner membrane component; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the binding-protein-dependent transport system permease family.
 
 
  
0.711
Elen_2199
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dde:Dde_1325 ATPase.
 
     
0.646
Elen_1535
PFAM: protein of unknown function DUF214; KEGG: gur:Gura_1658 hypothetical protein.
 
 
 0.643
Elen_0399
PFAM: ABC transporter related; protein of unknown function DUF214; SMART: AAA ATPase; KEGG: glo:Glov_3629 ABC transporter related; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
 
 
0.619
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.