Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Elen_1069KEGG: bcr:BCAH187_A3487 hypothetical protein. (210 aa)    
Predicted Functional Partners:
Elen_1070
PFAM: transcriptional regulator PadR family protein; KEGG: bcr:BCAH187_A3488 transcriptional regulator, PadR family.
 
  
 0.939
Elen_1068
KEGG: bsu:BSU33110 hypothetical protein.
     
 0.790
Elen_2509
KEGG: bat:BAS4124 hypothetical protein.
  
     0.642
Elen_1288
PFAM: aldo/keto reductase; KEGG: dal:Dalk_0886 aldo/keto reductase.
  
     0.469
Elen_1342
PFAM: 5'-Nucleotidase domain protein; extracellular solute-binding protein family 1; KEGG: bha:BH3845 ABC transporter (substrate-binding protein).
  
     0.467
Elen_0701
PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: gur:Gura_1554 pyridoxamine 5'-phosphate oxidase-related, FMN-binding.
  
     0.436
Elen_0713
Hypothetical protein; KEGG: bac:BamMC406_6682 type VI secretion system Vgr family protein.
  
     0.434
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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