STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1169Hypothetical protein; KEGG: bcr:BCAH187_A3810 putative bacteriocin ABC transporter, permease protein subunit. (295 aa)    
Predicted Functional Partners:
Elen_1168
Hypothetical protein; KEGG: bat:BAS3615 bacteriocin ABC transporter, permease protein subunit, putative.
 
     0.960
Elen_1167
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcr:BCAH187_A3812 putative bacteriocin ABC transporter, ATP-binding protein.
 
  
 0.951
Elen_1171
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: bcr:BCAH187_A3808 putative lantibiotic biosynthesis sensor histidine kinase.
 
   
 0.902
Elen_1170
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: bcr:BCAH187_A3809 putative lantibiotic biosynthesis DNA-binding response regulator.
 
   
 0.790
Elen_1164
KEGG: scl:sce8104 TetR family transcriptional regulator.
  
     0.635
Elen_1166
KEGG: sus:Acid_0589 hypothetical protein.
       0.507
Elen_2276
Hypothetical protein; KEGG: bcy:Bcer98_3920 bacitracin transport permease protein BCRB.
  
     0.401
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.