Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Elen_1237PFAM: FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; HI0933 family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: NAD(FAD)-dependent dehydrogenase. (965 aa)    
Predicted Functional Partners:
Elen_1238
PFAM: protein of unknown function DUF1667; KEGG: sat:SYN_02448 zinc finger protein.
    0.968
Elen_1464
PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] domain protein; KEGG: bha:BH3871 Rieske [2Fe-2S] iron-sulfur protein.
  
 
 0.853
Elen_2143
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: eca:ECA2957 pyruvate-flavodoxin oxidoreductase.
     
 0.756
Elen_0253
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: hsm:HSM_0781 succinate dehydrogenase and fumarate reductase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
  
 
 0.739
atpA
ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.
  
 0.731
Elen_2250
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: asu:Asuc_1705 putative glutamate synthase (NADPH) small subunit.
  
 
 0.725
Elen_1896
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: oca:OCAR_4481 thioredoxin; Belongs to the thioredoxin family.
  
 
 0.720
Elen_0085
PFAM: Citrate synthase; KEGG: sfu:Sfum_2105 citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 0.717
Elen_0773
PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: cti:RALTA_A0248 conserved hypothetical protein; putative transmembrane protein.
  
 0.702
Elen_0139
PFAM: phosphoglucose isomerase (PGI); KEGG: rpe:RPE_3708 bifunctional transaldolase/phosoglucose isomerase.
  
  
 0.693
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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