STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1393KEGG: ank:AnaeK_1781 hypothetical protein. (186 aa)    
Predicted Functional Partners:
Elen_1395
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: glo:Glov_0945 succinate dehydrogenase.
     
 0.721
Elen_1394
PFAM: FMN-binding domain protein; KEGG: shl:Shal_2064 FMN-binding domain-containing protein.
       0.716
Elen_1396
Hypothetical protein; KEGG: GK10816 gene product from transcript GK10816- RA.
       0.716
Elen_1005
Hypothetical protein; KEGG: glo:Glov_3625 flavocytochrome c.
  
 
0.561
Elen_2528
Hypothetical protein; KEGG: gbm:Gbem_3597 flavocytochrome c.
  
 
0.561
Elen_2585
Hypothetical protein; KEGG: gbm:Gbem_3597 flavocytochrome c.
  
 
0.561
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.