STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1423PFAM: protein of unknown function DUF6 transmembrane; GCN5-related N-acetyltransferase; KEGG: ccv:CCV52592_0884 transporter. (520 aa)    
Predicted Functional Partners:
tsaD
Metalloendopeptidase, glycoprotease family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.756
Elen_1242
PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcr:BCAH187_A3704 transporter, drug/metabolite exporter family.
 
   
 0.545
Elen_1175
PFAM: protein of unknown function DUF6 transmembrane; KEGG: bcb:BCB4264_A3769 transporter, drug/metabolite exporter family.
 
   
 0.535
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
  
 0.532
Elen_2431
PFAM: Choline/ethanolamine kinase; aminoglycoside phosphotransferase; KEGG: hiq:CGSHiGG_00270 lic-1 operon protein.
  
  
 0.532
uvrA
Excinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.
  
    0.511
pheT
KEGG: ade:Adeh_1971 phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit.
  
 
 0.504
Elen_1390
PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: bba:Bd2267 putative potassium/proton antiporter.
  
  
 0.486
Elen_1549
Transcriptional regulator, AraC family; PFAM: AraC protein arabinose-binding/dimerisation; helix-turn-helix- domain containing protein AraC type; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: bsu:BSU02220 hypothetical protein.
  
  
 0.481
Elen_1424
PFAM: protein of unknown function DUF6 transmembrane; GCN5-related N-acetyltransferase; KEGG: ccv:CCV52592_0884 transporter.
 
    
0.475
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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