STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1431Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Bacterio-opsin activator HTH domain protein; SMART: regulatory protein LuxR; KEGG: gsu:GSU2670 LuxR family transcriptional regulator. (498 aa)    
Predicted Functional Partners:
Elen_1567
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: aha:AHA_0580 LuxR family transcriptional regulator.
 
   0.763
Elen_2003
PFAM: transcriptional activator domain; KEGG: afw:Anae109_1735 SARP family transcriptional regulator.
  
   
 0.719
Elen_0675
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; KEGG: kpe:KPK_4054 monoamine regulon transcriptional regulator.
 
   0.716
Elen_2108
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: vsa:VSAL_I2858 probable CsgAB operon transcriptional regulatory protein.
 
   0.708
Elen_0490
Superfamily I DNA and RNA helicase-like protein; KEGG: hne:HNE_2551 UvrD/REP helicase domain- containing protein.
  
     0.696
Elen_0020
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: dvm:DvMF_2265 transcriptional regulator, MarR family.
  
     0.695
Elen_1398
Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bph:Bphy_1008 MarR family transcriptional regulator.
  
     0.693
Elen_2742
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: reh:H16_A1292 ATP-dependent transcriptional regulator,MalT-family.
  
     0.691
Elen_1277
PFAM: cytochrome B561; KEGG: spl:Spea_2031 Ni/Fe-hydrogenase, b-type cytochrome subunit.
  
     0.678
Elen_1262
KEGG: sus:Acid_2702 hypothetical protein.
 
     0.663
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.