node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Elen_1442 | Elen_2803 | Elen_1442 | Elen_2803 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.707 |
Elen_1442 | rplC | Elen_1442 | Elen_0962 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.700 |
Elen_1442 | rplD | Elen_1442 | Elen_0963 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.737 |
Elen_1442 | rplM | Elen_1442 | Elen_0346 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.724 |
Elen_1442 | rplP | Elen_1442 | Elen_2171 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.692 |
Elen_1442 | rplU | Elen_1442 | Elen_2013 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.733 |
Elen_1442 | rplW | Elen_1442 | Elen_0964 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.692 |
Elen_1442 | rpsC | Elen_1442 | Elen_2172 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.777 |
Elen_1442 | rpsO | Elen_1442 | Elen_1629 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.732 |
Elen_1442 | rpsT | Elen_1442 | Elen_1654 | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.720 |
Elen_2803 | Elen_1442 | Elen_2803 | Elen_1442 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rce:RC1_2061 ABC transporter, ATP-binding protein, putative. | 0.707 |
Elen_2803 | rplC | Elen_2803 | Elen_0962 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.987 |
Elen_2803 | rplD | Elen_2803 | Elen_0963 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel. | 0.992 |
Elen_2803 | rplM | Elen_2803 | Elen_0346 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.988 |
Elen_2803 | rplP | Elen_2803 | Elen_2171 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.991 |
Elen_2803 | rplU | Elen_2803 | Elen_2013 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.985 |
Elen_2803 | rplW | Elen_2803 | Elen_0964 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.986 |
Elen_2803 | rpsC | Elen_2803 | Elen_2172 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.987 |
Elen_2803 | rpsO | Elen_2803 | Elen_1629 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.990 |
Elen_2803 | rpsT | Elen_2803 | Elen_1654 | TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: dal:Dalk_1888 ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.957 |