STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1518KEGG: pcr:Pcryo_2410 hypothetical protein. (372 aa)    
Predicted Functional Partners:
Elen_1269
KEGG: btr:Btr_2267 hypothetical protein.
   
 0.557
Elen_1517
PFAM: N-6 DNA methylase; KEGG: sbm:Shew185_4454 N-6 DNA methylase.
   
   0.524
Elen_1516
KEGG: maq:Maqu_0414 restriction modification system DNA specificity subunit.
     
 0.487
Elen_1514
PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: kpn:KPN_pKPN4p07083 putative transposase.
       0.478
Elen_1513
KEGG: oan:Oant_0577 hypothetical protein.
       0.475
Elen_1515
PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: xac:XAC2898 type I restriction-modification system endonuclease.
       0.475
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.