STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1584PFAM: amino acid-binding ACT domain protein; KEGG: dol:Dole_2322 amino acid-binding ACT domain- containing protein. (144 aa)    
Predicted Functional Partners:
Elen_1583
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: dps:DP1265 indolepyruvate oxidoreductase subunit B.
 
    0.935
Elen_1585
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   0.927
Elen_1582
Thiamine pyrophosphate protein domain protein TPP-binding; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
 
    0.913
gluQ
glutamyl-tRNA synthetase class Ic; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.
  
    0.765
Elen_1578
Phenylacetate--CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   0.734
Elen_0057
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: pca:Pcar_1567 indolepyruvate oxidoreductase, alpha subunit.
 
    0.601
Elen_0060
KEGG: sfu:Sfum_0379 phenylacetate--CoA ligase.
 
   0.596
Elen_1579
PFAM: amino acid-binding ACT domain protein; KEGG: dal:Dalk_1710 amino acid-binding ACT domain protein.
 
    
0.542
Elen_0058
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: rpe:RPE_0985 indolepyruvate ferredoxin oxidoreductase.
 
    0.520
Elen_0409
KEGG: azo:azo2395 phenylacetate--CoA ligase.
 
   0.490
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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