STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Elen_1686KEGG: pca:Pcar_0233 hypothetical protein. (79 aa)    
Predicted Functional Partners:
Elen_1687
Cysteine desulfurase family protein; KEGG: gsu:GSU1868 aminotransferase, class V; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; aminotransferase class-III; Cys/Met metabolism pyridoxal-phosphate- dependent protein.
 
   
 0.916
Elen_1688
PFAM: SirA family protein; KEGG: sat:SYN_01072 putative cytoplasmic protein; Belongs to the sulfur carrier protein TusA family.
 
   
 0.908
Elen_1685
TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: ccv:CCV52592_0874 (R)-2-hydroxyglutaryl-CoA dehydratase activator (2-hydroxyglutaryl-CoA dehydratase component A).
 
     0.741
Elen_1690
PFAM: 2-hydroxyglutaryl-CoA dehydratase D- component; KEGG: dal:Dalk_3066 2-hydroxyglutaryl-CoA dehydratase D-component.
 
     0.668
Elen_2494
PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: tdn:Suden_1782 ATPase.
  
     0.598
Elen_2493
KEGG: rpi:Rpic_1623 hypothetical protein.
  
     0.564
Elen_2276
Hypothetical protein; KEGG: bcy:Bcer98_3920 bacitracin transport permease protein BCRB.
  
     0.427
Elen_1689
Hypothetical protein.
       0.421
Your Current Organism:
Eggerthella lenta
NCBI taxonomy Id: 479437
Other names: E. lenta DSM 2243, Eggerthella lenta DSM 2243, Eggerthella lenta str. DSM 2243, Eggerthella lenta strain DSM 2243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.